This is because they are 6-pin fan headers. Simplified explanation: think of these fans as 2x 4-pin fans side-by-side, with a shared power wire. There is only one power adjustment, and it affects both fans together.
The BMC treats it as a single fan when writing/sending commands. I know it's confusing because your 6x 6-pin fans appear in a sensor read as 12 fans.
On the sensor read side of the equation, the behavior you'll encounter depends on how the motherboard's fan headers are wired, and how the BMC chip is programmed, which version it is, and how the middleware (e.g. Redfish) is setup by the mobo manufacturer. MOST of the time these days there are 2x tach wires, so you're able to get 2x read signals off the 4-pin fan pair associated with any given 6-pin fan header. There are some instances of boards (usually older flavors) where the dual fans get their tachs averaged and reported as a single fan. To my knowledge, there is no standard requirement, but there are typical practices.
Bottom line is think of 2 read numbers (fan sensor names x2) <--> 1 write number (fan id).
Note: there now also exist 6-pin fan headers that only have one physical fan, where the extra wires are usually 5vdc and applied to other features such as LED lighting. I've never seen that on a server board, but have on some modern non-server boards.