I'll probe around with my meter a bit more.
As it so happens, I DO have a 100mhz scope and an old logic analyzer sitting next to my healing bench.
I have considered doing the POE board swap the next chance I can to take the core network down. Might be a while for that though.
Since they're responding to commands (I've seen the error when it doesn't due to a missing resistor I had to replace) I'd think its maybe port 1 or 2 (the only ones I've tried so far) that have the issue.
I'll get the others turned on and see if they're fine or broken.
The unit the PoE board came from died unexpectedly, and even with
@fohdeesha 's magic JTAG box, we weren't able to bring it back.